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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933212.1_cds_XP_016479584.1_71112
CDS Infomation

[gene=LOC107800856] [db_xref=GeneID:107800856] [protein=nodulin homeobox-like isoform X2] [protein_id=XP_016479584.1] [location=join(18037..18144,18275..18493,19251..19382,19515..19610,20631..20792,21194..21485,21564..21580,21611..21716,21791..21860,22160..22223,24977..25459,25550..25584,26129..26657)] [gbkey=CDS]
Sequence

ATGGGCCTTTTGCATTCTACTCTGGTTGCTTCCAGTCTCTACTTATTGACTGTCTGTATA
TCTTCACAATGGCATGAGCTTGCTCAAGTTTTGCTTGCATATTACAAGGTAGATGTACTC
ATAGATGCTGCCTTTGCTGCTGTTACTGTTGATATTAAAATTCTGCGGAGGAATTTATCA
GCTGATCATACTCATTCCCAGCAAGAATATGGTCTTAAAGCTGAAGAAACTTTAAACCAT
CTCTGCCAGCAGTGTGAGGCTTCTCTGCAGTTTCTTCAGTCACTATGTCAGCAAAAATCA
TTTCGGGAGCGTCTTGTTAAGAATAAGGAGTTGAGCAGCAAAGGCGGAGTTCTTTTGTTG
GCACAAGCTATCATGCACTTAGATGTATCTCCCTTAGTTACATTATCCTCCTCAATTGTT
GCTGCTGTATCAAGACTGAAATCTAAAGTATTATCTATTTTGTTGAATCTCTGTGAAGCA
GAGAGTCTATCCTACCTGGATGAGGTTGCCAGTACCCCTGCAAGCCTTGATTTAGCAAAG
TCTATTGCTCTCGAGGTTCTTAATTTGCTGAAGAAAATGTTTGGAACGGGTTTCCAACAA
TCTGTTGCTCCATCTGAGAAAATTTATCCGAAAGGACAGTTACAACTCAATGCAATGCGG
CTAGCTGACATCTTCTCAGACGACTCAAATTTTCGGTCATTTATCACCACTCACTTTACT
GAAGTTTTGACGGAAATCTTTTCGGTCGCGCATGGAGAGTTCGTGTCTAGTTGGTGCTCA
TCTGACCTTCCAATACGTGAAGAAGATGCTACTTTGGAATATGACCCTTTTGCAGCAGCT
GGATGGGTATTGGATTTATTTCCATTTTCTGATCAGTCAAATACAATGAGTATAGAGCCA
ACTTTTGTTCCTTCCCATGTGCCTCGACTGTCTTATCCACATCAGAGAACATCATTGTTG
GTCAAAGTATTAGCAAATCTCCATTGTTTTGTTCCTGATATATGCAAAGAGGAGAAGGAT
CTTTTTTTTAATAAATTTGTTCAGTTTTTGAGAACAAAAGTTTCCAAAACCCCAGAAGGG
TTTAAATCCATTTCTGATTCTCATAAAGCAGCTACTGTTAGCCGAAACCTTGGTTCCCTG
TTAAGTCATGCAAAGTCTCTGATACCTGCTTTTCTGAATGAGGAGGACGTGCAGCTTTTA
AGGGTGTTCATCACTCAGTTAGAGTCTCTGATTACTCCCCGTGCATGCGGAGAAAATCGA
GTTCAAGAGGCTCAGAACCTGGGGGCATGCTTGCCCCCTCAACTCAGGGAAGTAGCCATG
GATCTTAACAACAGACTGAACCAGCTGAATTCCAGGATCAATGGCGAAGGTCAATCAGGT
GAGGCTGGGATGAAAGCCGAAATGACAGAACAAGATAAATTTATTGCTACAGATATAGAG
ATGAAGGATATTGAGAAAGATACTCAGAATGTGGAAACTAGTGGCTCCGATTCCAGCTCC
TCACGAAGTAGGCACCCAACAGATCAAGCTGGGAAAGTTGAGAAAATAAATTGCAATGGT
CCTGGAGAGGGTAGAGAGGATGAAATGGTTGAAGCTTCACAGCATGAAGAGAAGCAACAA
AGGAAACGGAAGCGAACTATAATGAACGAAAAACAGATATCACTTATGGAGAAGGCCCTT
ATGGACGAACCTGATATGCAACGAAATAAAGCGTCACTAGAATTTTGGGCTAAAGAATTA
AGTGTTCATGGTTCAGAGGTTACAAAGTCGCAGCTCAAGAATTGGCTAAATAATCGGAAA
GCAAGGTTAGCTCGTGCTGCTAAGGATGGTCGTACGCTGTCTGAAGGGGATAATCTTGAC
AAACATGGTGGGTCCCTCGTACTACCTCCCTGTGACTCACCTGGCAGTCCTGTCGAGGAT
GTCGGTAACCTCTCTGCTGCTAGAGAAAATGTGCAGAGGGTAACTGACCCGGTTCTGAGC
ACTTGTTTTACAGAAAACCCAGCGGCTGTATCTGTAGCTTCAACTGAAACGGCCAAGTGT
ATGGCAGGCCAGTACGTTGTGCTTGTAAATGACAAAGCAGAAGAGATAGGGAGAGGAAAG
GTATGTCAAGTCAGTGGCAAGTGGTATCAAAGGGACCTGGAGGAGTTAGGGACTTGTGTT
GTGGATATTATTGATCTCAAGGTCGACAGGTCTGCTAAGCTTCCTTACCCATCAGAACTA
ACTGGAACATCATTTGATCAGGCTGAAAGAAAATTTGGGTTCATGCGAGTCTTGTGGCAG
TCCAGCAAACTTTTTGTGCTGCCAGCTCGGTGA

Peptide Sequence

PEP ID

XP_016479584.1
PEP Infomation

PREDICTED: nodulin homeobox-like isoform X2 [Nicotiana tabacum]
Sequence

MGLLHSTLVASSLYLLTVCISSQWHELAQVLLAYYKVDVLIDAAFAAVTVDIKILRRNLS
ADHTHSQQEYGLKAEETLNHLCQQCEASLQFLQSLCQQKSFRERLVKNKELSSKGGVLLL
AQAIMHLDVSPLVTLSSSIVAAVSRLKSKVLSILLNLCEAESLSYLDEVASTPASLDLAK
SIALEVLNLLKKMFGTGFQQSVAPSEKIYPKGQLQLNAMRLADIFSDDSNFRSFITTHFT
EVLTEIFSVAHGEFVSSWCSSDLPIREEDATLEYDPFAAAGWVLDLFPFSDQSNTMSIEP
TFVPSHVPRLSYPHQRTSLLVKVLANLHCFVPDICKEEKDLFFNKFVQFLRTKVSKTPEG
FKSISDSHKAATVSRNLGSLLSHAKSLIPAFLNEEDVQLLRVFITQLESLITPRACGENR
VQEAQNLGACLPPQLREVAMDLNNRLNQLNSRINGEGQSGEAGMKAEMTEQDKFIATDIE
MKDIEKDTQNVETSGSDSSSSRSRHPTDQAGKVEKINCNGPGEGREDEMVEASQHEEKQQ
RKRKRTIMNEKQISLMEKALMDEPDMQRNKASLEFWAKELSVHGSEVTKSQLKNWLNNRK
ARLARAAKDGRTLSEGDNLDKHGGSLVLPPCDSPGSPVEDVGNLSAARENVQRVTDPVLS
TCFTENPAAVSVASTETAKCMAGQYVVLVNDKAEEIGRGKVCQVSGKWYQRDLEELGTCV
VDIIDLKVDRSAKLPYPSELTGTSFDQAERKFGFMRVLWQSSKLFVLPAR

Transcript Sequence

Gene sequence data has not been registered.